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DATE 2017-04-01

LEARN

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MESSAGE
DATE 2017-04-09
FROM Ruben Safir
SUBJECT Subject: [Learn] Free Software in Biology
From learn-bounces-at-nylxs.com Sun Apr 9 13:47:16 2017
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https://www.mothur.org/
Welcome to the website for the mothur project, initiated by Dr. Patrick
Schloss and his software development team in the Department of
Microbiology & Immunology at The University of Michigan. This project
seeks to develop a single piece of open-source, expandable software to
fill the bioinformatics needs of the microbial ecology community. In
February 2009 we released the first version of mothur, which had
accelerated versions of the popular DOTUR and SONS programs. Since then
we have added the functionality of a number of other popular tools.
mothur is currently the most cited bioinformatics tool for analyzing 16S
rRNA gene sequences. Step inside the wiki and user forum and learn how
you can use mothur to process data generated by Sanger, PacBio,
IonTorrent, 454, and Illumina (MiSeq/HiSeq). If you would like to
contribute code to the project feel free to download the source code and
make your own improvements. Alternatively, if you have an idea or a
need, but lack the programming expertise, let us know and we'll add it
to the queue of features we would like to add. Our current goal is to
release a new iteration of the project every couple of months.
Subscribe to mothur mailing list

http://app.stitcher.com/browse/feed/16149/details

This Week in Microbiology
Loading Show Info
Whoops, something went wrong!Retry
This Week in Microbiology (TWiM). A podcast about unseen life on Earth
hosted by Vincent Racaniello and friends. Following in the path of his
successful shows 'This Week in Virology' (TWiV) and 'This Week in
Parasitism' (TWiP), Racaniello and=E2=80=A6 This Week in Microbiology (TWiM=
). A
podcast about unseen life on Earth hosted by Vincent Racaniello and
friends. Following in the path of his successful shows 'This Week in
Virology' (TWiV) and 'This Week in Parasitism' (TWiP), Racaniello and
guests produce an informal yet informative conversation about microbes
which is accessible to everyone, no matter what their science
background. As a science Professor at Columbia University, Racaniello
has spent his academic career directing a research laboratory focused on
viruses. His enthusiasm for teaching inspired him to reach beyond the
classroom using new media. TWiM is for everyone who wants to learn about
the science of microbiology in a casual way. While there are no exams or
pop quizzes, TWiM does encourage interaction with the audience via
comments on specific episodes, email and Skype. Listeners can also use
www.MicrobeWorld.org to suggest topics for the show by submitting
articles, papers, video and images to the site and tagging them with
"TWiM". Each week Racaniello will view the tagged content and select
items for discussion. For questions and/or feedback please email
ccondayan-at-asmusa.org. =E2=80=A6read more
Most Recent Episode
You=E2=80=99re going to learn R - TWiM 149
62 Minutes 3 days ago
The TWiM team speaks with Pat Schloss about assigning sequence data to
operational taxonomic units, and his experience with mSphere Direct, a
new way of submitting papers for publication.Hosts: Vincent Racaniello,
Michael Schmidt, Elio Schaechter, and Michele Swanson.Special guest: Pat
SchlossSubscr=E2=80=A6
Now Playing
-- =

So many immigrant groups have swept through our town
that Brooklyn, like Atlantis, reaches mythological
proportions in the mind of the world - RI Safir 1998
http://www.mrbrklyn.com

DRM is THEFT - We are the STAKEHOLDERS - RI Safir 2002
http://www.nylxs.com - Leadership Development in Free Software
http://www2.mrbrklyn.com/resources - Unpublished Archive
http://www.coinhangout.com - coins!
http://www.brooklyn-living.com

Being so tracked is for FARM ANIMALS and and extermination camps,
but incompatible with living as a free human being. -RI Safir 2013
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  1. 2017-04-02 Ruben Safir <mrbrklyn-at-panix.com> Subject: [Learn] posted thesis
  2. 2017-04-04 From: "soledad.esteban" <soledad.esteban-at-icp.cat> Subject: [Learn] [dinosaur] Course The Use of Phylogenies in the Study of
  3. 2017-04-05 ruben <ruben-at-mrbrklyn.com> Subject: [Learn] Bounds for phylogenetic network space metrics
  4. 2017-04-07 Christopher League <league-at-contrapunctus.net> Re: [Learn] Ariel U
  5. 2017-04-07 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] Ariel found the info
  6. 2017-04-07 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] I need a job that is not a pharmacist
  7. 2017-04-08 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] Complete Thesis
  8. 2017-04-09 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] Free Software in Biology
  9. 2017-04-09 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] Fwd: [dinosaur] Course The Use of Phylogenies in the Study
  10. 2017-04-09 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] More programming in biology
  11. 2017-04-09 Ruben Safir <mrbrklyn-at-panix.com> Subject: [Learn] thesis
  12. 2017-04-13 Dann Pigdon <dannj-at-alphalink.com.au> Re: [Learn] [dinosaur] Main goals in future dinosaur paleontology
  13. 2017-04-13 Ruben Safir <ruben-at-mrbrklyn.com> Re: [Learn] [dinosaur] Main goals in future dinosaur paleontology
  14. 2017-04-14 Daniel Madzia <daniel.madzia-at-gmail.com> Re: [Learn] [dinosaur] Bringing Palaeontology to People - an
  15. 2017-04-16 Ruben Safir <ruben-at-mrbrklyn.com> Re: [Learn] Ariel Contacts
  16. 2017-04-16 Ruben Safir <ruben-at-mrbrklyn.com> Re: [Learn] neural nets
  17. 2017-04-16 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] neural nets
  18. 2017-04-16 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] The new excuse for newpseak
  19. 2017-04-19 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] Computational Mathematics in Biology - R Programming -
  20. 2017-04-19 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] need feedback
  21. 2017-04-21 From: "Mancini, Sabin (DFS)" <Sabin.Mancini-at-dfs.ny.gov> Re: [Learn] jobs: state government of New York also has openings
  22. 2017-04-21 Ruben Safir <ruben-at-mrbrklyn.com> Re: [Learn] jobs: state government of New York also has openings
  23. 2017-04-21 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] jobs
  24. 2017-04-21 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] NYLXS Journal
  25. 2017-04-21 Manjaro summary <noreply-at-manjaro.org> Subject: [Learn] [Manjaro] Summary
  26. 2017-04-25 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] Ignoring the local student
  27. 2017-04-25 From: "Pat Schloss" <pschloss-at-umich.edu> Subject: [Learn] [mothur] Postdoctoral training opportunity in Schloss lab
  28. 2017-04-28 Ruben Safir <ruben-at-mrbrklyn.com> Re: [Learn] [Hangout of NYLXS] NYLXS Journal
  29. 2017-04-29 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] online quick and dirty compiler
  30. 2017-04-30 Ruben Safir <ruben-at-mrbrklyn.com> Subject: [Learn] celmatix

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